Etymology
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bene- 

sometimes beni-, word-forming element meaning "well," from Latin bene (adv.) "well, in the right way, honorably, properly," from PIE *dwenelo-, suffixed (adverbial) form of root *deu- (2) "to do, perform; show favor, revere." Opposed to mal-. From the same source come Latin bonus "good," bellus "handsome, fine, pretty," and possibly beatus "blessed," beare "to make blessed."

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-cracy 

word-forming element forming nouns meaning "rule or government by," from French -cratie or directly from Medieval Latin -cratia, from Greek -kratia "power, might; rule, sway; power over; a power, authority," from kratos "strength," from PIE *kre-tes- "power, strength," suffixed form of root *kar- "hard." The connective -o- has come to be viewed as part of it. Productive in English from c. 1800.

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hypsi- 

word-forming element meaning "high, on high, lofty," from Greek hypsi (adv.) "aloft, on high," related to hypsos "height" (see hypso-).

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cis- 

word-forming element meaning "on the near side of, on this side," from Latin preposition cis "on this side" (in reference to place or time), related to citra (adv.) "on this side," from PIE *ki-s, suffixed form of root *ko-, the stem of demonstrative pronoun meaning "this." Opposed to trans- or ultra-. Originally only of place, sometimes 19c. of time; 21c. of life situations (such as cis-gender, which is attested by 2011).

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amphi- 

before a vowel amph-, word-forming element meaning "on both sides, of both kinds; on all sides, all around," from Greek amphi (prep., adv.) "round about, on both sides of, all around; about, regarding," which is cognate with Latin ambi-, both from PIE root *ambhi- "around."

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ana- 

before vowels an-, word-forming element meaning: 1. "upward, up in place or time," 2. "back, backward, against," 3. "again, anew," from Greek ana (prep.) "up, on, upon; up to, toward; throughout; back, backwards; again, anew," from an extended form of PIE root *an- (1) "on, upon, above" (see on, which is the English cognate). In old medical prescriptions, ana by itself meant "an equal quantity of each."

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presby- 

word-forming element meaning "old," from Greek presby-, combining form of presbys "elderly, aged," as a noun, "elder, old man," which is of uncertain and much debated origin and phonetic development (some Doric forms have -g- in place of -b-). The first element is likely *pres- "before, in front" (from PIE root *per- (1) "forward," hence "in front of, before, first"). Perhaps the whole originally meant "one who leads the cattle," from the root of bous "cow." Watkins, however, has it from PIE *pres-gwu- "going before," with second element from root *gw-u- "going," a suffixed form of root *gwa- "to come."

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intra- 

word-forming element meaning "within, inside, on the inside," from Latin preposition intra "on the inside, within, in, into;" of time, "during, in the course of," related to inter "between," from PIE *en-t(e)ro-, from root *en "in." Commonly opposed to extra-, and compare inter-. The use of intra as a prefix was rare in classical Latin.

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Graeco- 

also Greco-, modern word-forming element, from Latin Graecus "Greek" (see Greek (n.)) on model of Anglo-, Franco-, etc.

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intro- 

word-forming element, from Latin intro (adv.) "in, on the inside, within, to the inside," from PIE *en-t(e)ro-, suffixed form of root *en "in."

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